Chronomics Analysis Toolkit
  • Home
    • Citing this site
    • Reference Material
    • Contact Us
  • Analysis Techniques
    • Actogram
    • Smoothing
    • Autocorrelation
    • Crosscorrelation
    • Cosinor
    • Distributions
  • Running CAT
    • Running CAT Cosinor >
      • Interpreting CATCall
      • Data Formats
      • Errors
    • Running CAT PMC
    • Running CAT PMCTest
  • Installation
    • Installing R
    • Installing CAT >
      • Version Archive
    • Vignettes
  • Sample Output
    • CAT Output
    • Cosinor Output
  • Data
  • MBS Supplemental Materials
  • Supplemental

ANALYSIS OF RHYTHMS USING R: CHRONOMICS ANALYSIS TOOLKIT (CAT)   

Thesis for Master of Biological Science, July 2013
analysis_of_rhythms_in_r-gierke_2013.pdf
File Size: 9225 kb
File Type: pdf
Download File


Supplemental Materials

Supplemental materials associated with the capstone project in partial fulfillment of the requirements for the degree of  Master of Biological Sciences, July 2013, Cathy Lee Gierke:  Analysis of Rhythm Using R:  Chronomics Analysis Toolkit (CAT)
Instructions for running CAT                    Discussion or parameters and usage of CAT
Sample output from CAT                          A sample output of running all of the CAT functions, with the exception of Cosinor

rclgityumen.doc
File Size: 41 kb
File Type: doc
Download File

Lee Gierke, Cathy, Cornélissen, Germaine, Powell, Deborah, Beaty, Larry, Gierke, Chuck, and Halberg,Franz (2013). Intermittent mild Vascular Variability Anomalies (VVAs), a challenge for the overall population and care providers. (Tyumen), in press.

This paper summarizes results from 9 consecutive weeks of C-ABPM by myself and another individual. While I (CL) had a consistently acceptable chronobiologic summary (referred to as a sphygmochron, see below), CG had one or several VVAs in several weekly summaries. The paper was presented at a conference in Tyumen, Russia.

cgie001.xls
File Size: 432 kb
File Type: xls
Download File

Sphygmochron results for CG from first week of an ongoing C-ABPM recording  (Male, 68y, with CHAT).  Discussed in article above.
©Copyright June 2013, Cathy Lee Gierke